Fitness data for HMPREF1058_RS18350 in Phocaeicola vulgatus CL09T03C04

RagB/SusD family nutrient uptake outer membrane protein
SEED: FIG00909118: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1 -0.6 -2.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day1 -0.4 -1.8 compare
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -0.4 -1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 -0.3 -1.9 compare
carbon source Pectic galactan from potato 5mg/ml (C) -0.3 -2.5 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3 -0.3 -2.1 compare
carbon source Arabinan from sugar beet 5mg/ml (C) -0.3 -2.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse3; day1 -0.3 -1.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day9 -0.3 -2.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -0.3 -2.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 -0.3 -1.7 compare
carbon source Pectin from citrus peel; autoclaved 2.5 mg/ml (C) -0.3 -2.2 compare
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -0.3 -2.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 -0.3 -1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -0.3 -2.1 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.3 -1.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 -0.3 -1.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 -0.3 -1.7 compare
carbon source Dextran 5 mg/ml (C) +0.3 +1.7 compare
carbon source D-Mannose 20 mM (C) +0.3 +2.1 compare