Fitness data for HMPREF1058_RS18310 in Phocaeicola vulgatus CL09T03C04

RagB/SusD family nutrient uptake outer membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Pectic galactan from potato 5mg/ml (C) -1.3 -6.4 compare
carbon source Pectic galactan from potato 5mg/ml (C) -1.1 -6.1 compare
carbon source Polygalacturonic 5 mg/ml (C) -0.7 -3.0 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.7 -3.6 compare
carbon source Mannan from Saccharomyces cerevisiae 5 mg/ml (C) -0.6 -3.0 compare
carbon source D-Glucose 5 mg/ml (C) -0.6 -3.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 -0.6 -2.8 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.6 -2.0 compare
carbon source Pectin from citrus peel (C) -0.6 -3.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day6 -0.6 -2.9 compare
carbon source Polygalacturonic ultrapure 5mg/ml (C) -0.5 -3.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day1 -0.5 -2.2 compare
carbon source (+)-Arabinogalactan; filtered 2.5 mg/ml (C) -0.5 -2.9 compare
carbon source D-Fructose 20 mM (C) -0.5 -2.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day5 -0.5 -2.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 -0.5 -2.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day4 -0.5 -2.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 -0.5 -2.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 -0.5 -2.1 compare
carbon source Mannan from Saccharomyces cerevisiae 5 mg/ml (C) -0.4 -2.3 compare