Fitness data for HMPREF1058_RS15955 in Phocaeicola vulgatus CL09T03C04

RagB/SusD family nutrient uptake outer membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.5 -2.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 -0.4 -1.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -0.3 -1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day4 +0.3 +2.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 +0.3 +1.6 compare
carbon source (+)-Arabinogalactan; filtered 2.5 mg/ml (C) +0.3 +1.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 +0.3 +2.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day5 +0.3 +2.1 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.3 +2.3 compare
carbon source Arabinan from sugar beet 5mg/ml (C) +0.3 +1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 +0.3 +2.0 compare
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) +0.4 +1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 +0.4 +1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 +0.4 +2.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 +0.4 +1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1 +0.5 +2.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 +0.5 +2.5 compare
carbon source Polygalacturonic 5 mg/ml (C) +0.5 +2.6 compare
carbon source Polygalacturonic 5 mg/ml (C) +0.5 +2.2 compare
carbon source (+)-Arabinogalactan 5 mg/ml (C) +0.6 +2.2 compare