Fitness data for HMPREF1058_RS15695 in Phocaeicola vulgatus CL09T03C04

SGNH/GDSL hydrolase family protein
SEED: polysaccharide deacetylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source (+)-Arabinogalactan 5 mg/ml (C) -0.4 -2.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4 -0.3 -1.8 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +0.3 +1.9 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.3 +2.1 compare
carbon source Pectin from citrus peel (C) +0.3 +2.0 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +0.3 +2.0 compare
carbon source Pectin from citrus peel (C) +0.3 +1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day1 +0.3 +1.5 compare
carbon source D-Glucose (C) +0.3 +1.6 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen +0.3 +2.2 compare
carbon source D-Galactose (C) +0.3 +1.7 compare
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) +0.3 +2.2 compare
carbon source Dextran 5 mg/ml (C) +0.3 +1.7 compare
carbon source Galactose 1-phosphate dipotassium salt (C) +0.4 +2.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day3 +0.4 +2.1 compare
carbon source D-Mannose (C) +0.4 +2.5 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.4 +2.2 compare
carbon source D-Galactose 20 mM (C) +0.4 +2.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 +0.5 +2.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day1 +0.5 +3.0 compare