Fitness data for HMPREF1058_RS13040 in Phocaeicola vulgatus CL09T03C04

winged helix-turn-helix domain-containing protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source Pectin from citrus peel (C) -1.7 -3.3 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre 5 mg/ml (C) -0.9 -2.2 compare
carbon source Sucrose 20 mM (C) -0.8 -1.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day1 -0.7 -0.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 +0.7 +1.5 compare
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) +0.7 +2.4 compare
carbon source Mucin from porcine stomach,Type II; autoclaved 2.5 mg/ml (C) +0.7 +2.5 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.7 +1.6 compare
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.7 +3.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day2 +0.7 +1.6 compare
carbon source Dextrin from potato starch; autoclaved 2.5 mg/ml (C) +0.7 +2.9 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_lowCys_noNitrogen +0.7 +3.0 compare
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) +0.7 +1.9 compare
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) +0.8 +2.8 compare
carbon source beta-Cyclodextrin 5 mg/ml (C) +0.8 +2.7 compare
carbon source D-Arabinose 2.5 mg/ml (C) +0.8 +3.1 compare
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.9 +4.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse3; day1 +0.9 +2.3 compare
carbon source (+)-Arabinogalactan; filtered 2.5 mg/ml (C) +1.1 +2.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1 +1.3 +3.2 compare