Fitness data for HMPREF1058_RS12605 in Phocaeicola vulgatus CL09T03C04

HAD family hydrolase
SEED: Haloacid dehalogenase-like hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.6 -2.5 compare
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) -0.5 -2.7 compare
carbon source D-Mannose (C) -0.5 -2.6 compare
carbon source Mucin from porcine stomach type III; autoclaved 2.5 mg/ml (C) -0.4 -2.6 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.4 -1.9 compare
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.4 -2.0 compare
carbon source D-Galactose (C) -0.4 -1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 +0.3 +1.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4 +0.4 +1.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day5 +0.4 +2.0 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day7 +0.4 +1.9 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.4 +1.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day3 +0.4 +2.5 compare
carbon source Pectin from citrus peel (C) +0.4 +1.8 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre 5 mg/ml (C) +0.5 +2.8 compare
carbon source (+)-Arabinogalactan 5 mg/ml (C) +0.5 +1.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day7 +0.5 +2.2 compare
carbon source Dextran 5 mg/ml (C) +0.5 +1.7 compare
carbon source Amylose from potato 5 mg/ml (C) +0.5 +1.7 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre 5 mg/ml (C) +0.5 +2.8 compare