Fitness data for HMPREF1058_RS12280 in Phocaeicola vulgatus CL09T03C04

GntR family transcriptional regulator
SEED: Transcriptional regulator of fucose utilization, GntR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source L-Fucose 20 mM (C) -2.2 -5.9 compare
carbon source L-Fucose 20 mM (C) -1.9 -4.8 compare
carbon source D-Arabinose 20 mM (C) -1.7 -5.3 compare
carbon source L-Fucose 2.5 mg/ml (C) -1.5 -5.4 compare
carbon source D-Arabinose 2.5 mg/ml (C) -1.4 -4.2 compare
carbon source D-Arabinose 2.5 mg/ml (C) -1.3 -4.0 compare
carbon source L-Fucose 2.5 mg/ml (C) -1.3 -4.7 compare
carbon source D-Arabinose 20 mM (C) -1.1 -2.8 compare
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) -0.5 -2.4 compare
carbon source (+)-Arabinogalactan; filtered 2.5 mg/ml (C) -0.4 -2.0 compare
carbon source D-Glucose 5 mg/ml (C) -0.4 -2.7 compare
carbon source Galactose 1-phosphate dipotassium salt (C) -0.4 -2.4 compare
carbon source Galactose 1-phosphate dipotassium salt (C) -0.4 -2.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 +0.3 +1.5 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.3 +1.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse13; day7 +0.3 +1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day2 +0.4 +1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day3 +0.4 +2.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 +0.4 +1.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 +0.4 +2.4 compare