Fitness data for HMPREF1058_RS11760 in Phocaeicola vulgatus CL09T03C04

TonB-dependent receptor
SEED: TonB family protein / TonB-dependent receptor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
carbon source D-Galactose (C) -0.2 -1.8 compare
carbon source NAG (C) -0.2 -1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day1 -0.2 -1.4 compare
carbon source Polygalacturonic 5 mg/ml (C) -0.2 -1.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day1 -0.2 -1.5 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.2 -1.8 compare
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.2 -1.8 compare
carbon source (+)-Arabinogalactan; filtered 2.5 mg/ml (C) -0.2 -1.1 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre 5 mg/ml (C) +0.2 +1.5 compare
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) +0.3 +1.7 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.3 +1.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day2 +0.3 +2.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 +0.4 +2.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 +0.4 +2.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 +0.5 +3.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day3 +0.5 +3.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 +0.6 +4.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 +0.7 +5.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 +0.9 +5.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 +0.9 +5.9 compare