Fitness data for HMPREF1058_RS09880 in Phocaeicola vulgatus CL09T03C04

DUF4134 domain-containing protein
SEED: Conjugative transposon protein TraE

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -2.3 -1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1 -1.9 -1.8 compare
carbon source (+)-Arabinogalactan 5 mg/ml (C) -1.8 -1.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 -1.3 -1.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1 -1.2 -1.2 compare
carbon source D-Fructose 2.5 mg/ml (C) -1.2 -2.6 compare
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) -1.2 -2.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 -1.1 -1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 -1.0 -1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 -1.0 -1.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 -1.0 -0.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6 -1.0 -1.3 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -1.0 -1.7 compare
carbon source Sucrose 20 mM (C) +1.0 +1.1 compare
carbon source Dextran 5 mg/ml (C) +1.0 +1.0 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.1 +1.3 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +1.2 +0.9 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_DTT_NaS_noNitrogen +1.2 +3.0 compare
carbon source (+)-Arabinogalactan; autoclaved 2.5 mg/ml (C) +1.4 +1.8 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +1.5 +1.5 compare