Fitness data for HMPREF1058_RS08920 in Phocaeicola vulgatus CL09T03C04

lytic transglycosylase domain-containing protein
SEED: Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen -0.5 -2.0 compare
carbon source Dextran 5 mg/ml (C) -0.4 -1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day4 +0.4 +1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day7 +0.4 +1.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day6 +0.4 +1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 +0.4 +1.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day6 +0.4 +1.3 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.4 +2.5 compare
carbon source Pectin from apple; autoclaved 2.5 mg/ml (C) +0.4 +1.7 compare
carbon source Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C) +0.4 +1.4 compare
carbon source D-Mannose (C) +0.4 +2.1 compare
carbon source Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C) +0.4 +1.3 compare
carbon source D-Mannose 2.5 mg/ml (C) +0.5 +3.4 compare
carbon source D-Galactose 2.5 mg/ml (C) +0.5 +3.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day7 +0.5 +1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 +0.5 +1.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 +0.6 +2.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day14 +0.6 +1.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 +0.7 +2.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 +0.8 +2.9 compare