Fitness data for HMPREF1058_RS08865 in Phocaeicola vulgatus CL09T03C04

L-rhamnose isomerase
SEED: L-rhamnose isomerase (EC 5.3.1.14)
KEGG: L-rhamnose isomerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Rhamnose 20 mM (C) -6.4 -14.9 compare
carbon source L-Rhamnose 20 mM (C) -5.6 -15.8 compare
carbon source L-Fucose 20 mM (C) -3.5 -8.6 compare
carbon source L-Fucose 20 mM (C) -2.9 -10.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -2.5 -10.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 -2.2 -10.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day6 -1.9 -9.2 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 -1.5 -8.1 compare
carbon source Polygalacturonic 5 mg/ml (C) -1.2 -7.5 compare
carbon source Polygalacturonic 5 mg/ml (C) -1.2 -5.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day4 -1.1 -5.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day6 -1.1 -4.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 -1.0 -4.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 -0.9 -4.8 compare
carbon source D-Glucose 5 mg/ml (C) -0.9 -4.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -0.8 -3.4 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.8 -6.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 -0.8 -3.3 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre 5 mg/ml (C) -0.8 -4.2 compare
carbon source polygalacturonic; autoclaved 2.5 mg/ml (C) -0.7 -4.1 compare