Fitness data for HMPREF1058_RS08395 in Phocaeicola vulgatus CL09T03C04

carbohydrate binding domain-containing protein
SEED: Alpha-N-arabinofuranosidase (EC 3.2.1.55)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source D-Glucose 5 mg/ml (C) -1.0 -6.2 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.9 -6.3 compare
carbon source D-Glucose 5 mg/ml (C) -0.9 -5.8 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.9 -5.9 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.7 -4.5 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.5 -3.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day7 -0.5 -2.1 compare
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -0.4 -2.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day3 -0.4 -2.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 -0.4 -2.1 compare
carbon source (+)-Arabinogalactan; autoclaved 5 mg/ml (C) -0.4 -2.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 -0.3 -1.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day6 -0.3 -1.5 compare
carbon source Polygalacturonic 5 mg/ml (C) +0.3 +2.0 compare
carbon source D-Galacturonic Acid 20 mM (C) +0.3 +1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day6 +0.3 +1.9 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse20; day9 +0.3 +1.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day7 +0.4 +2.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse17; day9 +0.4 +2.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 +0.5 +2.4 compare