Fitness data for HMPREF1058_RS05890 in Phocaeicola vulgatus CL09T03C04

class I SAM-dependent rRNA methyltransferase
SEED: LSU m5C1962 methyltransferase RlmI
KEGG: ribosomal RNA large subunit methyltransferase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse16; day9 -0.8 -3.6 compare
carbon source D-Maltose 20 mM (C) +0.7 +4.0 compare
carbon source Galactose 1-phosphate dipotassium salt (C) +0.8 +4.8 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.8 +5.3 compare
carbon source Arabinan from sugar beet 5mg/ml (C) +0.9 +5.8 compare
carbon source Polygalacturonic 5 mg/ml (C) +0.9 +4.6 compare
carbon source D-Maltose 20 mM (C) +0.9 +6.2 compare
carbon source Galactose 1-phosphate dipotassium salt (C) +0.9 +5.5 compare
carbon source NAG (C) +0.9 +5.7 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.9 +6.4 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +1.0 +7.2 compare
carbon source Arabinan from sugar beet 5mg/ml (C) +1.0 +6.1 compare
carbon source D-Mannose (C) +1.0 +6.9 compare
carbon source D-Glucose 5 mg/ml (C) +1.0 +5.8 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +1.1 +7.5 compare
carbon source D-Mannose (C) +1.1 +7.0 compare
carbon source D-Glucose 5 mg/ml (C) +1.1 +6.9 compare
carbon source NAG (C) +1.2 +7.9 compare
carbon source beta-Cyclodextrin 5 mg/ml (C) +1.3 +8.6 compare
carbon source beta-Cyclodextrin 5 mg/ml (C) +1.4 +8.8 compare