Fitness data for HMPREF1058_RS05630 in Phocaeicola vulgatus CL09T03C04

RNA polymerase sigma-70 factor
SEED: RNA polymerase ECF-type sigma factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 -1.8 -3.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day3 -1.6 -4.6 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse4; day2 -1.4 -3.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse8; day2 -1.4 -3.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 -1.3 -3.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day2 -1.2 -3.0 compare
carbon source Mannan from Saccharomyces cerevisiae 5 mg/ml (C) -1.0 -3.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day5 -0.9 -2.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 -0.9 -2.7 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day1 -0.8 -1.6 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day4 -0.8 -1.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day1 -0.8 -1.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day3 -0.8 -2.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day2 -0.7 -1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day5 -0.7 -2.0 compare
carbon source D-Glucose (C) -0.7 -2.1 compare
carbon source NAG 2.5 mg/ml (C) +0.7 +2.2 compare
carbon source (+)-Arabinogalactan 5 mg/ml (C) +0.8 +1.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse18; day9 +0.8 +2.6 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre 5 mg/ml (C) +0.9 +2.0 compare