Fitness data for HMPREF1058_RS05210 in Phocaeicola vulgatus CL09T03C04

SDR family oxidoreductase
SEED: 2-deoxy-D-gluconate 3-dehydrogenase (EC 1.1.1.125)
KEGG:

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source D-Glucose (C) -1.8 -2.7 compare
carbon source Arabinan from sugar beet 5mg/ml (C) -1.7 -2.3 compare
carbon source Arabinoxylan (Rye Flour); autoclaved 2.5 mg/ml (C) -1.5 -1.6 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre 5 mg/ml (C) -1.1 -1.4 compare
carbon source Amylose from potato 5 mg/ml (C) -1.1 -1.1 compare
carbon source NAG (C) -1.1 -2.0 compare
carbon source Galactose 1-phosphate dipotassium salt (C) -1.0 -2.0 compare
carbon source D-Galactose (C) -1.0 -1.4 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse12; day2 -0.9 -1.3 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse3; day1 +1.0 +1.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day4 +1.1 +2.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse8; day2 +1.2 +2.1 compare
carbon source Dextran 5 mg/ml (C) +1.2 +2.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day3 +1.3 +3.0 compare
carbon source Rhamnogalacturonan - from potato; autoclaved 2.5 mg/ml (C) +1.3 +3.2 compare
carbon source (+)-Arabinogalactan; filtered 2.5 mg/ml (C) +1.4 +2.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day5 +1.5 +3.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 +1.7 +3.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 +1.9 +3.3 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day2 +2.0 +3.4 compare