Fitness data for HMPREF1058_RS05000 in Phocaeicola vulgatus CL09T03C04

DUF4010 domain-containing protein
SEED: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Glucose 20 mM (C) -0.5 -2.7 compare
carbon source D-Galactose 20 mM (C) -0.5 -2.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day1 -0.5 -1.9 compare
carbon source Sucrose 20 mM (C) -0.4 -2.1 compare
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.4 +2.7 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day7 +0.4 +2.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5 +0.4 +1.7 compare
carbon source beta-Cyclodextrin 5 mg/ml (C) +0.4 +2.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=Mono; mouse19; day9 +0.4 +2.3 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre 5 mg/ml (C) +0.5 +2.1 compare
carbon source Polygalacturonic 5 mg/ml (C) +0.5 +2.9 compare
carbon source D-Mannose 2.5 mg/ml (C) +0.5 +3.0 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.5 +2.6 compare
carbon source D-Mannose 20 mM (C) +0.5 +3.3 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.5 +2.1 compare
carbon source D-Maltose 20 mM (C) +0.5 +3.1 compare
nitrogen source L-Asparagine (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +0.6 +1.8 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse15; day7 +0.6 +3.1 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=Mono; mouse14; day9 +0.6 +2.8 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day3 +0.7 +2.9 compare