Fitness data for HMPREF1058_RS03230 in Phocaeicola vulgatus CL09T03C04

ABC transporter permease
SEED: Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1)
KEGG: spermidine/putrescine transport system permease protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source D-Galactose 20 mM (C) -0.6 -1.9 compare
carbon source D-Galactose (C) -0.6 -2.4 compare
carbon source D-Mannose 20 mM (C) -0.5 -2.4 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) +0.5 +3.1 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day4 +0.6 +2.0 compare
nitrogen source L-Glutamine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.6 +2.2 compare
carbon source polygalacturonic (ultrapure); autoclaved 2.5 mg/ml (C) +0.6 +3.1 compare
carbon source Mannan from Saccharomyces cerevisiae 5 mg/ml (C) +0.6 +2.7 compare
nitrogen source L-Serine (N); Varel_Bryant_medium_Glucose_noMET_DTT_NaS_B12_noNitrogen +0.6 +2.7 compare
carbon source Polygalacturonic 5 mg/ml (C) +0.6 +2.5 compare
carbon source beta-Cyclodextrin 2.5 mg/ml (C) +0.6 +3.5 compare
carbon source Arabinan from sugar beet 5mg/ml (C) +0.6 +3.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse10; day4 +0.7 +2.0 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse7; day6 +0.7 +1.9 compare
carbon source D-Galacturonic Acid 20 mM (C) +0.7 +2.7 compare
nitrogen source Ammonium chloride (N); Varel_Bryant_medium_Glucose_DTT_noNitrogen +0.7 +1.4 compare
carbon source Polygalacturonic 5 mg/ml (C) +0.8 +3.5 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse9; day5 +0.9 +2.6 compare
carbon source Mannan from Saccharomyces cerevisiae 5 mg/ml (C) +0.9 +4.0 compare
carbon source beta-Cyclodextrin 5 mg/ml (C) +1.1 +4.4 compare