Fitness data for HMPREF1058_RS00040 in Phocaeicola vulgatus CL09T03C04

RagB/SusD family nutrient uptake outer membrane protein
SEED: FIG00405972: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source D-Glucose 5 mg/ml (C) -1.2 -7.0 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -1.1 -7.2 compare
carbon source D-Glucose 5 mg/ml (C) -1.0 -5.8 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.9 -5.7 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.9 -5.7 compare
carbon source Red Arabinan from sugar-beet; filtered 2.5 mg/ml (C) -0.7 -4.6 compare
carbon source Arabinan from sugar beet 5mg/ml (C) -0.7 -4.6 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre 5 mg/ml (C) -0.7 -2.7 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.7 -3.6 compare
carbon source Arabinan from sugar beet 5mg/ml (C) -0.6 -4.1 compare
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -0.6 -4.5 compare
carbon source Red Arabinan from sugar-beet; filtered 5 mg/ml (C) -0.6 -4.6 compare
carbon source Pectic galactan from potato 5mg/ml (C) -0.6 -4.4 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse5; day2 -0.6 -2.6 compare
carbon source Pectic galactan from potato 5mg/ml (C) -0.6 -3.9 compare
carbon source Rhamnogalacturonan from soy bean pectic fibre; autoclaved 2.5 mg/ml (C) -0.6 -3.2 compare
mouse diet=PolysaccharideDeficient; sample=FecalPellet; inoculation=MixComm; mouse11; day2 -0.5 -2.6 compare
carbon source beta-Cyclodextrin 5 mg/ml (C) -0.5 -2.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day7 -0.5 -1.9 compare
mouse diet=StandardDiet; sample=FecalPellet; inoculation=MixComm; mouse2; day8 -0.4 -1.7 compare