Fitness data for H281DRAFT_00505 in Paraburkholderia bryophila 376MFSha3.1

tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family
SEED: Hypothetical YciO protein, TsaC/YrdC paralog
KEGG: putative translation factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 128 experiments or choose conditions

group condition fitness t score  
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -1.7 compare
carbon source Sebacic (C) -0.6 -1.5 compare
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.6 -2.3 compare
carbon source succinate (C) -0.5 -1.9 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 -0.9 compare
carbon source Malonic (C) -0.4 -0.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.0 compare
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.5 +1.4 compare
carbon source Malonic (C) +0.5 +2.2 compare
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.5 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.4 compare
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.5 +1.4 compare
carbon source D-Glucose (C) +0.5 +1.4 compare
carbon source butyrate (C) +0.5 +1.0 compare
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.5 +1.7 compare
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.5 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.9 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.8 +1.2 compare
carbon source butyrate (C) +0.9 +3.3 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.1 +1.7 compare