Fitness data for EX31_RS02200 in Rahnella sp. WP5

Hcp family type VI secretion system effector
SEED: Uncharacterized protein ImpD
KEGG: type VI secretion system secreted protein Hcp

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
carbon source NLDM_metabolites (C) -1.4 -3.3 compare
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.7 -3.3 compare
nl-ccm; high oxygen NL-CCM; high oxygen -0.5 -2.3 compare
nitrogen source L-Glutamine (N); RCH2 media; no shaking -0.5 -1.6 compare
nitrogen source L-Serine (N); RCH2 media; shaking -0.5 -2.0 compare
nf_with10percent_fulln NF_with10percent_fullN -0.4 -2.1 compare
nl-ccm; high oxygen NL-CCM; high oxygen -0.4 -1.9 compare
nitrogen source L-Glutamine (N); ShewMM media; shaking -0.4 -1.9 compare
nitrogen source Ammonium chloride (N); RCH2 media; shaking -0.4 -1.6 compare
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.4 -1.9 compare
nf_with10percent_fulln NF_with10percent_fullN -0.4 -1.5 compare
nl-ccm; high oxygen NL-CCM; high oxygen -0.3 -1.5 compare
nitrogen source Ammonium chloride (N); ShewMM media; no shaking -0.3 -1.5 compare
nl-ccm; ambient oxygen NL-CCM; ambient oxygen -0.3 -1.5 compare
nitrogen source L-Serine (N); RCH2 media; shaking -0.3 -1.5 compare
nitrogen source L-Glutamine (N); RCH2 media; shaking +0.3 +1.6 compare
mixed community NL-CCM; Mixed culture; Herbiconiux sp. 11RBC 2:1 starting OD to Azospirillum +0.4 +1.8 compare
nitrogen source L-Glutamine (N); ShewMM media; no shaking +0.4 +1.5 compare
nitrogen source L-Serine (N); RCH2 media; no shaking +0.4 +1.7 compare
carbon source Sucrose (C) +0.6 +2.6 compare