Fitness data for BPHYT_RS35420 in Burkholderia phytofirmans PsJN

alanine dehydrogenase
SEED: Alanine dehydrogenase (EC 1.4.1.1)
KEGG: alanine dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.0 -3.3 compare
phage PHYTO3 MOI 0.1 -0.8 -1.9 compare
nitrogen source L-Phenylalanine (N) -0.7 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.0 compare
phage 36hr PHYTO10 MOI 10 -0.7 -1.5 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.5 -1.4 compare
phage 24hr PHYTO MOI 0.1 -0.5 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +1.4 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.6 +1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.6 +1.4 compare
motility outer cut, LB soft agar motility assay +0.6 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +2.0 compare
phage 24hr PHYTO7 MOI 1 +0.6 +2.6 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.7 compare
phage 24hr PHYTO3 MOI 10 +0.6 +1.4 compare
phage P. phyto PHYTO2 MOI 0.1 +0.7 +1.4 compare
supernatant control Vogels_fungal_media; pH 5.5 +0.7 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.3 compare