Fitness data for BPHYT_RS35155 in Burkholderia phytofirmans PsJN

TonB-denpendent receptor
SEED: Ferrichrome-iron receptor
KEGG: iron complex outermembrane recepter protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source L-Citrulline (N) -1.0 -5.9 compare
vitamin No vitamins t2 -0.5 -3.1 compare
nitrogen source L-Glutamic (N) -0.5 -2.3 compare
nitrogen source NAG (N) -0.4 -2.6 compare
carbon source D-Sorbitol (C) -0.3 -2.5 compare
carbon source D,L-Lactate (C) -0.3 -2.4 compare
carbon source L-Phenylalanine (C) -0.3 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.1 compare
phage 36hr PHYTO2 MOI 0.1 +0.3 +1.8 compare
phage 36hr PHYTO4 MOI 1 +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.3 +1.6 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.4 compare
phage 36hr PHYTO3 MOI 1 +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.3 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.4 +1.6 compare
nitrogen source D-Alanine (N) +0.4 +2.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.2 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.5 +1.8 compare