Fitness data for BPHYT_RS34425 in Burkholderia phytofirmans PsJN

lactate dehydrogenase
SEED: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.7 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.4 -1.8 compare
nophagecontrol 24hr Phyto Lib Only +0.3 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +1.7 compare
phage 36hr PHYTO10 MOI 10 +0.3 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.2 compare
phage 24hr PHYTO3 MOI 10 +0.3 +1.6 compare
phage 24hr PHYTO MOI 0.1 +0.4 +1.8 compare
carbon source Malonic (C) +0.4 +1.6 compare
phage 36hr PHYTO1 MOI 10 +0.4 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +2.0 compare
nophagecontrol 36hr Phyto Lib Only +0.4 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.4 +2.0 compare
phage P. phyto PHYTO2 MOI 0.1 +0.4 +2.0 compare
phage 36hr PHYTO7 MOI 0.1 +0.4 +1.9 compare
supernatant control Vogels_fungal_media 0.1X +0.4 +2.1 compare
motility outer cut, LB soft agar motility assay +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.4 compare