Fitness data for BPHYT_RS34245 in Burkholderia phytofirmans PsJN

ABC transporter for L-rhamnose/L-fucose/xylitol, ATPase component (from data)
Original annotation: multidrug ABC transporter ATP-binding protein
SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
KEGG: simple sugar transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source L-Fucose (C) -4.2 -2.8 compare
carbon source Xylitol (C) -2.6 -4.9 compare
carbon source L-Rhamnose (C) -2.5 -5.5 compare
phage 36hr PHYTO9 MOI 0.1 -1.0 -1.2 compare
phage 36hr PHYTO11 MOI 0.1 -0.9 -1.1 compare
phage 36hr PHYTO10 MOI 10 -0.9 -0.8 compare
phage 24hr PHYTO1 MOI 10 -0.9 -2.0 compare
phage 36hr PHYTO1 MOI 10 -0.8 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.8 -1.2 compare
phage 36hr PHYTO2 MOI 1 -0.8 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.4 compare
carbon source 2-Deoxy-D-Ribose (C) +0.9 +4.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.3 compare
carbon source 2-Deoxy-D-Ribose (C) +1.1 +4.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 +1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +3.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.3 +1.4 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +3.1 +9.6 compare