Fitness data for BPHYT_RS34230 in Burkholderia phytofirmans PsJN

L-fuconate dehydratase; L-rhamnonate dehydratase (EC 4.2.1.68; EC 4.2.1.90) (from data)
Original annotation: hydrolase
SEED: L-fuconate dehydratase (EC 4.2.1.68), type 2
KEGG: altronate hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
carbon source L-Fucose (C) -4.7 -8.3 compare
carbon source L-Rhamnose (C) -2.3 -8.9 compare
carbon source 2-Deoxy-D-Ribose (C) -0.9 -4.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +1.6 compare
carbon source Sebacic (C) +0.7 +2.1 compare
phage 36hr PHYTO10 MOI 1 +0.7 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.3 compare
phage 24hr PHYTO2 MOI 0.1 +0.7 +2.4 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.7 +2.8 compare
motility inner cut, LB soft agar motility assay +0.7 +2.0 compare
carbon source Sebacic (C) +0.7 +3.2 compare
phage 24hr PHYTO6 MOI 0.1 +0.8 +2.7 compare
phage 36hr PHYTO MOI 0.1 +0.8 +2.4 compare
carbon source Protocatechuic Acid (C) +0.8 +2.0 compare
phage 24hr PHYTO MOI 0.1 +0.8 +2.1 compare
phage 36hr PHYTO11 MOI 1 +0.8 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +1.9 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +1.1 +3.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +1.4 +3.3 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days +1.4 +3.1 compare