Fitness data for BPHYT_RS34215 in Burkholderia phytofirmans PsJN

2-keto-3-deoxy-L-fuconate 4-dehydrogenase FucDH (from data)
Original annotation: oxidoreductase
SEED: 2-keto-3-deoxy-L-fuconate dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-Fucose (C) -5.1 -8.1 compare
carbon source L-Rhamnose (C) -1.9 -3.5 compare
phage P. phyto PHYTO2 MOI 1 -0.8 -2.1 compare
nitrogen source L-Lysine (N) -0.8 -2.5 compare
phage 36hr PHYTO11 MOI 1 -0.5 -2.2 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.5 -1.9 compare
supernatant control Vogels_fungal_media 0.1X -0.5 -1.8 compare
phage P. phyto PHYTO2 MOI 0.1 -0.5 -1.4 compare
phage 24hr PHYTO4 MOI 10 -0.4 -1.7 compare
phage 36hr PHYTO4 MOI 1 -0.4 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.3 compare
temperature LB, 37C +0.5 +2.1 compare
carbon source L-Glutamine (C) +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
motility outer cut, LB soft agar motility assay +0.5 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.6 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.8 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +2.6 compare