Fitness data for BPHYT_RS34210 in Burkholderia phytofirmans PsJN

2,4-diketo-3-deoxy-L-rhamnonate hydrolase (EC 3.7.1.-) (from data)
Original annotation: ureidoglycolate lyase
SEED: 2,4-diketo-3-deoxy-L-fuconate hydrolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source L-Rhamnose (C) -5.6 -7.7 compare
carbon source L-Fucose (C) -4.6 -9.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days +0.6 +3.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +2.4 compare
phage 24hr PHYTO2 MOI 0.1 +0.6 +2.7 compare
phage P. phyto PHYTO2 MOI 1 +0.6 +2.3 compare
carbon source L-Glutamine (C) +0.7 +2.8 compare
phage 36hr PHYTO1 MOI 10 +0.7 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.7 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.0 compare
phage P. phyto PHYTO2 MOI 0.1 +0.7 +3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +3.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.5 +2.7 compare