Fitness data for BPHYT_RS33775 in Burkholderia phytofirmans PsJN

alpha-amylase
SEED: Trehalose synthase (EC 5.4.99.16)
KEGG: maltose alpha-D-glucosyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -1.4 -6.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.5 -2.9 compare
phage 36hr PHYTO8 MOI 10 -0.5 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.4 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.7 compare
phage 36hr PHYTO4 MOI 0.1 -0.3 -1.9 compare
carbon source 2-Deoxy-D-Ribose (C) -0.3 -2.2 compare
carbon source D-Xylose (C) +0.3 +2.2 compare
carbon source succinate (C) +0.3 +2.3 compare
phage 24hr PHYTO6 MOI 10 +0.3 +1.7 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.3 compare
carbon source D-Glucosamine Hydrochloride (C) +0.4 +2.9 compare
carbon source Xylitol (C) +0.4 +2.8 compare
carbon source Tween 20 (C) +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +2.8 compare