Fitness data for BPHYT_RS32830 in Burkholderia phytofirmans PsJN

AraC family transcriptional regulator
SEED: Xylose activator XylR (AraC family)
KEGG: LacI family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
carbon source D-Xylose (C) -2.0 -1.9 compare
vitamin No vitamins t2 -1.5 -2.1 compare
carbon source Tween 20 (C) -1.4 -1.4 compare
carbon source D-Glucose (C) -1.2 -1.1 compare
carbon source Phenylacetic 5 mM (C) -1.2 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 +2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +2.5 compare
supernatant control Vogels_fungal_media; pH 5.5 +1.2 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 +2.2 compare
phage 36hr PHYTO2 MOI 1 +1.2 +2.2 compare
phage 36hr PHYTO1 MOI 10 +1.2 +2.3 compare
phage 24hr PHYTO4 MOI 0.1 +1.2 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +1.3 +2.2 compare
nitrogen source Uridine (N) +1.3 +2.0 compare
nophagecontrol 24hr Phyto Lib Only +1.3 +3.2 compare
phage 36hr PHYTO6 MOI 0.1 +1.3 +2.4 compare
carbon source Malonic (C) +1.5 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.6 +3.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.7 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +3.1 +2.3 compare