Fitness data for BPHYT_RS32820 in Burkholderia phytofirmans PsJN

xylose ABC transporter substrate-binding protein
SEED: Xylose ABC transporter, periplasmic xylose-binding protein XylF
KEGG: D-xylose transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.1 -1.5 compare
nitrogen source L-Lysine (N) -0.9 -1.1 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.8 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -0.8 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -1.1 compare
phage 24hr PHYTO6 MOI 10 -0.7 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7 -0.9 compare
phage 24hr PHYTO3 MOI 10 +0.7 +1.3 compare
phage 36hr PHYTO1 MOI 1 +0.7 +1.8 compare
phage 36hr PHYTO2 MOI 1 +0.7 +1.5 compare
phage 24hr PHYTO2 MOI 1 +0.7 +1.6 compare
phage 36hr PHYTO3 MOI 1 +0.8 +1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB +0.8 +1.6 compare
phage 36hr PHYTO4 MOI 1 +0.9 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.6 +3.6 compare
carbon source Disodium Glutarate (C) +3.1 +12.0 compare
carbon source Disodium Glutarate (C) +3.3 +13.4 compare