Fitness data for BPHYT_RS32815 in Burkholderia phytofirmans PsJN

sugar ABC transporter
SEED: D-xylose transport ATP-binding protein XylG
KEGG: D-xylose transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
phage 24hr PHYTO11 MOI 1 -2.3 -1.9 compare
phage 24hr PHYTO6 MOI 10 -2.1 -1.9 compare
phage 24hr PHYTO2 MOI 0.1 -2.0 -1.8 compare
phage 24hr PHYTO3 MOI 10 -1.9 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.8 -1.9 compare
phage 36hr PHYTO2 MOI 1 -1.6 -1.7 compare
phage 36hr PHYTO6 MOI 1 -1.5 -2.0 compare
phage 24hr PHYTO10 MOI 1 -1.4 -1.8 compare
phage 36hr PHYTO9 MOI 0.1 -1.4 -2.0 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.4 -1.7 compare
phage 36hr PHYTO4 MOI 1 -1.4 -1.7 compare
phage 36hr PHYTO10 MOI 10 -1.3 -1.6 compare
nitrogen source L-Isoleucine (N) -1.3 -1.5 compare
carbon source D-Glucose (C) -1.2 -2.6 compare
nitrogen source Putrescine (N) -1.2 -2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.0 compare
carbon source D-Glucose (C) -1.1 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.1 +2.1 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +1.2 +2.2 compare
supernatant control Vogels_fungal_media 0.1X +1.3 +2.4 compare