Fitness data for BPHYT_RS32795 in Burkholderia phytofirmans PsJN

RND transporter
SEED: Outer membrane component of tripartite multidrug resistance system

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage 36hr PHYTO11 MOI 1 -0.6 -2.6 compare
phage 36hr PHYTO2 MOI 0.1 -0.6 -3.4 compare
motility outer cut, LB soft agar motility assay -0.6 -2.6 compare
phage 24hr PHYTO3 MOI 0.1 -0.5 -3.0 compare
phage 24hr PHYTO4 MOI 10 -0.5 -1.9 compare
phage 24hr PHYTO10 MOI 1 -0.5 -1.9 compare
phage 24hr PHYTO6 MOI 10 -0.5 -1.8 compare
phage 36hr PHYTO8 MOI 0.1 -0.5 -2.3 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 -2.6 compare
phage 36hr PHYTO3 MOI 1 -0.5 -1.9 compare
phage 24hr PHYTO1 MOI 10 -0.5 -2.0 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.5 -1.9 compare
phage 36hr PHYTO3 MOI 0.1 -0.5 -2.2 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -0.5 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.4 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.2 compare