Fitness data for BPHYT_RS32125 in Burkholderia phytofirmans PsJN

DNA polymerase
SEED: IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB -0.8 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.1 compare
nitrogen source L-Isoleucine (N) -0.7 -2.5 compare
supernatant control Vogels_fungal_media 0.1X -0.7 -2.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -0.7 -2.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -2.7 compare
phage 36hr PHYTO11 MOI 1 -0.6 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.6 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.6 compare
phage 24hr PHYTO1 MOI 10 +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.1 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.7 +2.5 compare
nitrogen source L-Lysine (N) +0.7 +2.6 compare