Fitness data for BPHYT_RS31635 in Burkholderia phytofirmans PsJN

choline dehydrogenase
SEED: Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -3.3 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.7 -1.3 compare
vitamin With vitamins t1 -1.6 -2.4 compare
nitrogen source L-Lysine (N) -1.4 -1.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -1.3 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.2 -1.1 compare
vitamin No vitamins t1 -1.1 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.1 -1.0 compare
phage 24hr PHYTO1 MOI 10 +1.1 +2.2 compare
phage 36hr PHYTO7 MOI 1 +1.1 +1.9 compare
phage 24hr PHYTO6 MOI 1 +1.1 +2.3 compare
phage 24hr PHYTO9 MOI 0.1 +1.1 +1.8 compare
nitrogen source Ammonium chloride (N) +1.1 +2.3 compare
no phage control No phage control +1.1 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +1.4 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +1.5 +1.1 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +1.6 +3.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +2.2 +2.6 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +2.9 +2.0 compare