Fitness data for BPHYT_RS31470 in Burkholderia phytofirmans PsJN

NAD(P)H dehydrogenase (quinone)
SEED: Flavoprotein WrbA
KEGG: Trp repressor binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.9 -1.8 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.2 -1.9 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -0.9 -1.2 compare
phage 24hr PHYTO7 MOI 10 -0.9 -1.2 compare
phage 36hr PHYTO10 MOI 10 -0.9 -1.5 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.8 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +2.0 compare
carbon source Sebacic (C) +0.9 +1.3 compare
carbon source Dodecandioic (C) +0.9 +2.5 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.9 +0.9 compare
phage 36hr PHYTO6 MOI 0.1 +1.0 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X +1.0 +2.4 compare
phage 36hr PHYTO7 MOI 1 +1.0 +2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.0 +1.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0 +2.3 compare
carbon source adipate (C) +1.1 +1.3 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.1 +2.8 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +1.1 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +1.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.2 +2.9 compare