Fitness data for BPHYT_RS30425 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: Glycine cleavage system transcriptional activator GcvA

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.8 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.0 -1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.6 -1.2 compare
nitrogen source L-Glutamic (N) -1.5 -1.0 compare
carbon source Malonic (C) -1.4 -1.7 compare
carbon source Disodium Glutarate (C) -1.3 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.3 -1.1 compare
phage 24hr PHYTO7 MOI 10 -1.2 -1.1 compare
phage 24hr PHYTO2 MOI 0.1 -1.2 -1.1 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X -1.2 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.0 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.1 -1.0 compare
phage 24hr PHYTO4 MOI 10 -1.1 -0.8 compare
vitamin No vitamins t1 +1.1 +1.3 compare
motility outer cut, LB soft agar motility assay +1.1 +1.6 compare
nutrient L-Serine +1.2 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.3 +2.0 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.3 +2.4 compare
carbon source Suberic (C) +1.5 +1.8 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +1.5 +1.7 compare