Fitness data for BPHYT_RS30230 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
phage P. phyto corn MOI 0.1 -1.4 -2.9 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -1.3 -2.5 compare
phage 24hr PHYTO6 MOI 0.1 -1.3 -2.0 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -1.2 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -1.2 compare
phage 36hr PHYTO10 MOI 10 -1.1 -1.1 compare
phage P. phyto PHYTO2 MOI 1 -1.0 -1.0 compare
phage 36hr PHYTO7 MOI 0.1 -1.0 -1.2 compare
phage 36hr PHYTO4 MOI 1 -1.0 -1.5 compare
phage 24hr PHYTO6 MOI 1 -1.0 -1.5 compare
phage 24hr PHYTO4 MOI 0.1 -0.9 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.1 compare
phage 36hr PHYTO3 MOI 1 -0.9 -1.8 compare
motility outer cut, LB soft agar motility assay +0.9 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.0 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days +1.1 +0.7 compare
lb_dap plate control LB_DAP agar plate, outgrowth in LB +1.1 +2.3 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +1.2 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.6 +1.4 compare