Fitness data for BPHYT_RS30140 in Burkholderia phytofirmans PsJN

3-methylitaconate isomerase
SEED: 2-methylaconitate cis-trans isomerase
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.8)


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group condition fitness t score  
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -3.7 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.7 -1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -3.4 -1.6 compare
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 -3.3 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -3.1 -1.5 compare
no phage control No phage control -2.7 -1.2 compare
carbon source propionate (C) -2.5 -1.6 compare
phage P. phyto corn MOI 0.1 -2.5 -1.1 compare
tn7 efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pRH19; outgrowth in LB_gent50 -2.4 -1.3 compare
supernatant control Vogels_fungal_media; pH 5.5 -2.3 -1.1 compare
nitrogen source L-Lysine (N) -2.3 -1.1 compare
carbon source Suberic (C) -2.3 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.3 -1.5 compare
phage P. phyto PHYTO2 MOI 1 -2.1 -0.8 compare
phage P. phyto PHYTO2 MOI 0.1 -2.1 -1.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -2.1 -1.6 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -2.0 -1.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.9 -1.0 compare
vitamin No vitamins t1 -1.8 -2.4 compare
phage PHYTO3 MOI 0.1 -1.8 -0.6 compare