Fitness data for BPHYT_RS29860 in Burkholderia phytofirmans PsJN

sugar ABC transporter substrate-binding protein
SEED: Polysaccharide export lipoprotein Wza
KEGG: polysaccharide export outer membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.0 -1.1 compare
phage 24hr PHYTO6 MOI 0.1 -1.0 -1.4 compare
phage 24hr PHYTO10 MOI 1 -0.9 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.8 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.7 -1.4 compare
phage 36hr PHYTO1 MOI 10 -0.7 -0.8 compare
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.7 -1.8 compare
phage 24hr PHYTO9 MOI 10 -0.7 -1.0 compare
no phage control No phage control -0.7 -1.7 compare
phage 24hr PHYTO10 MOI 10 -0.7 -0.7 compare
nophagecontrol 24hr Phyto Lib Only -0.7 -0.8 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 -1.8 compare
nutrient L-Serine -0.7 -2.0 compare
phage 36hr PHYTO8 MOI 10 -0.6 -1.0 compare
phage 24hr PHYTO8 MOI 1 +0.6 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.7 +0.9 compare
nitrogen source L-Isoleucine (N) +0.7 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.1 compare
phage 24hr PHYTO3 MOI 10 +1.0 +1.7 compare