Fitness data for BPHYT_RS29770 in Burkholderia phytofirmans PsJN

diguanylate cyclase
SEED: FOG: GGDEF domain

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
phage 24hr PHYTO6 MOI 1 -1.0 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.8 compare
phage 24hr PHYTO6 MOI 10 -0.7 -1.2 compare
carbon source L-Fucose (C) -0.7 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -1.4 compare
motility inner cut, LB soft agar motility assay -0.6 -2.1 compare
phage 24hr PHYTO2 MOI 1 -0.6 -1.0 compare
carbon source Protocatechuic Acid (C) -0.6 -2.0 compare
phage P. phyto PHYTO2 MOI 1 -0.6 -1.2 compare
phage 36hr PHYTO2 MOI 0.1 -0.6 -1.3 compare
carbon source Trisodium citrate (C) -0.5 -1.4 compare
tn7 efficiency Outgrowth after Tn7 transformation -0.5 -1.1 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.5 -2.2 compare
nutrient Min media with glucose -0.5 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.5 compare
nophagecontrol 24hr Phyto Lib Only +0.5 +1.7 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent +0.7 +3.3 compare
carbon source Malonic (C) +1.1 +2.9 compare