Fitness data for BPHYT_RS29125 in Burkholderia phytofirmans PsJN

RND transporter
SEED: Heavy metal RND efflux outer membrane protein, CzcC family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.0 compare
phage 36hr PHYTO4 MOI 1 -0.9 -1.7 compare
phage 36hr PHYTO1 MOI 10 -0.8 -1.8 compare
phage 24hr PHYTO1 MOI 10 -0.7 -1.9 compare
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB -0.7 -1.9 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -0.7 -1.3 compare
nitrogen source L-Isoleucine (N) -0.7 -2.0 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.6 -0.7 compare
phage 36hr PHYTO3 MOI 1 -0.6 -1.3 compare
phage 24hr PHYTO3 MOI 1 -0.6 -1.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -0.9 compare
phage 24hr PHYTO11 MOI 1 +0.6 +1.6 compare
carbon source Malonic (C) +0.6 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.6 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.6 +1.4 compare
carbon source Malonic (C) +0.7 +1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.7 +2.5 compare
phage 24hr PHYTO11 MOI 0.1 +0.7 +2.0 compare