Fitness data for BPHYT_RS29110 in Burkholderia phytofirmans PsJN

DNA-directed DNA polymerase
SEED: DNA polymerase IV (EC 2.7.7.7)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
phage 24hr PHYTO11 MOI 0.1 -1.9 -2.1 compare
phage P. phyto PHYTO2 MOI 1 -1.6 -2.1 compare
nophagecontrol 36hr Phyto Lib only -1.5 -1.9 compare
motility inner cut, LB soft agar motility assay -1.4 -3.4 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.3 -2.7 compare
phage P. phyto PHYTO2 MOI 1 -1.2 -1.5 compare
pH LB, pH6 -1.2 -2.6 compare
phage 24hr PHYTO11 MOI 1 -1.2 -1.8 compare
carbon source Phenylacetic 5 mM (C) -1.2 -1.6 compare
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.2 -1.4 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -1.2 -1.3 compare
r2a control R2A control -1.1 -2.8 compare
nitrogen source L-Lysine (N) +1.1 +1.4 compare
nitrogen source L-Isoleucine (N) +1.1 +2.6 compare
carbon source Malonic (C) +1.2 +1.6 compare
nitrogen source L-Citrulline (N) +1.2 +2.0 compare
phage 36hr PHYTO10 MOI 10 +1.2 +2.2 compare
phage 36hr PHYTO7 MOI 1 +1.3 +2.6 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +1.8 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +2.2 compare