Fitness data for BPHYT_RS29005 in Burkholderia phytofirmans PsJN

transporter
SEED: RND efflux system, inner membrane transporter CmeB
KEGG: hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage 36hr PHYTO2 MOI 1 -2.6 -2.9 compare
phage 36hr PHYTO2 MOI 1 -1.7 -1.7 compare
phage 24hr PHYTO1 MOI 10 -1.6 -2.2 compare
phage 36hr PHYTO6 MOI 10 -1.3 -1.4 compare
phage 24hr PHYTO3 MOI 10 -1.2 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 -2.1 compare
phage 24hr PHYTO11 MOI 1 -1.2 -2.2 compare
phage 36hr PHYTO1 MOI 10 -1.1 -1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -1.0 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.9 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -1.0 compare
phage 36hr PHYTO7 MOI 1 -0.8 -1.3 compare
phage 24hr PHYTO10 MOI 10 -0.8 -1.4 compare
phage 24hr PHYTO1 MOI 10 +0.8 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 +1.5 compare
phage 36hr PHYTO4 MOI 1 +0.8 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.0 +1.7 compare
phage 24hr PHYTO4 MOI 10 +1.3 +2.1 compare