Fitness data for BPHYT_RS28830 in Burkholderia phytofirmans PsJN

LysR family transcriptional regulator
SEED: Positive regulator of Tartrate dehydrogenase/decarboxylase/D-malic enzyme

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.0)


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group condition fitness t score  
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -4.2 -0.9 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -3.4 -1.4 compare
phage 24hr PHYTO9 MOI 0.1 -3.2 -1.0 compare
phage 24hr PHYTO9 MOI 10 -3.2 -0.9 compare
phage 36hr PHYTO6 MOI 0.1 -2.9 -0.9 compare
nitrogen source L-Asparagine (N) -2.8 -1.7 compare
phage 24hr PHYTO6 MOI 1 -2.8 -0.8 compare
phage 24hr PHYTO4 MOI 0.1 -2.7 -0.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -2.7 -1.0 compare
phage 36hr PHYTO8 MOI 10 -2.7 -0.8 compare
phage 24hr PHYTO6 MOI 10 -2.7 -0.7 compare
phage 36hr PHYTO8 MOI 10 -2.7 -0.8 compare
phage P. phyto PHYTO2 MOI 1 -2.7 -0.6 compare
phage 24hr PHYTO4 MOI 10 -2.2 -0.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +2.0 +1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +2.0 +2.6 compare
lb_nosalt LB_noSalt +2.2 +2.3 compare
phage P. phyto PHYTO2 MOI 1 +2.4 +1.7 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +2.8 +2.0 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +3.2 +2.4 compare