Fitness data for BPHYT_RS28705 in Burkholderia phytofirmans PsJN

IclR family transcriptional regulator
SEED: Transcriptional regulator, IclR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.4)


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group condition fitness t score  
carbon source Phenylacetic 5 mM (C) -5.6 -1.4 compare
supernatant control Vogels_fungal_media; pH 5.5 -5.4 -1.2 compare
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -5.4 -1.2 compare
carbon source Sebacic (C) -5.2 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -5.0 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.7 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.6 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -3.5 -0.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.5 -1.3 compare
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.1 -1.6 compare
carbon source L-Fucose (C) -3.1 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -3.0 -1.5 compare
motility outer cut, LB soft agar motility assay -2.9 -1.5 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -2.9 -0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.7 -1.2 compare
stress Paraquat dichloride 0.064 mg/ml -2.6 -1.8 compare
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -2.6 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.5 -1.1 compare
carbon source Gly-Glu (C) -2.5 -2.2 compare
carbon source D-Glucose (C) -2.4 -1.9 compare