Fitness data for BPHYT_RS28540 in Burkholderia phytofirmans PsJN

amino acid ABC substrate-binding protein
SEED: Urea ABC transporter, urea binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
carbon source Tween 20 (C) -1.3 -3.0 compare
phage P. phyto PHYTO2 MOI 0.1 -1.0 -2.3 compare
carbon source Disodium Glutarate (C) -0.9 -3.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -2.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.3 compare
carbon source adipate (C) -0.7 -1.6 compare
carbon source Disodium Glutarate (C) -0.7 -2.6 compare
motility outer cut, LB soft agar motility assay -0.7 -1.8 compare
carbon source Sebacic (C) -0.7 -1.6 compare
phage 24hr PHYTO3 MOI 0.1 +0.6 +1.6 compare
supernatant control:fungal media R2A with Vogels_fungal_media 0.2X +0.6 +2.6 compare
phage 24hr PHYTO3 MOI 10 +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 +2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.7 +1.5 compare
phage 36hr PHYTO7 MOI 1 +0.7 +2.3 compare
phage 24hr PHYTO9 MOI 10 +0.8 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 +2.4 compare
phage 24hr PHYTO6 MOI 10 +0.9 +2.6 compare
phage 24hr PHYTO7 MOI 1 +1.0 +4.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.1 +1.8 compare