Fitness data for BPHYT_RS28360 in Burkholderia phytofirmans PsJN

carboxymuconolactone decarboxylase
SEED: 4-carboxymuconolactone decarboxylase (EC 4.1.1.44)
KEGG: 4-carboxymuconolactone decarboxylase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.6)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.8 -1.1 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -2.7 -1.7 compare
nophagecontrol 24hr Phyto Lib Only -2.7 -1.2 compare
phage 24hr PHYTO2 MOI 0.1 -2.6 -1.2 compare
phage 24hr PHYTO4 MOI 0.1 -2.5 -1.2 compare
phage 36hr PHYTO8 MOI 0.1 -2.5 -1.2 compare
phage 24hr PHYTO11 MOI 1 -2.4 -1.1 compare
phage P. phyto PHYTO2 MOI 1 -2.2 -0.8 compare
carbon source D-Glucose (C) -2.2 -1.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -2.1 -1.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.9 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.8 -0.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.8 -1.1 compare
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -1.7 -1.3 compare
nitrogen source L-Lysine (N) -1.7 -1.1 compare
phage 36hr PHYTO6 MOI 1 -1.6 -0.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.6 -0.9 compare
phage 24hr PHYTO3 MOI 10 +1.6 +1.5 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.9 +2.1 compare
carbon source Phenylacetic 5 mM (C) +2.4 +2.6 compare