Fitness data for BPHYT_RS28270 in Burkholderia phytofirmans PsJN

ABC transporter substrate-binding protein
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.3 -2.7 compare
phage 36hr PHYTO9 MOI 1 -1.2 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.1 -4.6 compare
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.9 -1.6 compare
phage 36hr PHYTO8 MOI 10 -0.9 -1.8 compare
phage P. phyto corn MOI 0.1 -0.9 -2.0 compare
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.8 -1.8 compare
carbon source D-Glucose 20 mM (C) -0.8 -2.4 compare
phage 36hr PHYTO4 MOI 1 -0.8 -1.1 compare
phage 24hr PHYTO6 MOI 0.1 +0.8 +2.5 compare
phage 24hr PHYTO3 MOI 10 +0.8 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.9 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.5 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB +0.9 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X +0.9 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB +0.9 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +1.1 compare