Fitness data for BPHYT_RS28235 in Burkholderia phytofirmans PsJN

L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) (from data)
Original annotation: short-chain dehydrogenase
SEED: L-rhamnose-1-dehydrogenase ( EC 1.1.1.173)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


Add gene:

Or see all 321 experiments or choose conditions

group condition fitness t score  
phage 36hr PHYTO2 MOI 1 -3.0 -1.5 compare
carbon source L-Rhamnose (C) -2.9 -5.2 compare
phage 36hr PHYTO2 MOI 1 -2.4 -1.5 compare
phage 24hr PHYTO3 MOI 10 -1.7 -1.2 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 -1.4 -2.5 compare
phage 36hr PHYTO3 MOI 0.1 -1.4 -1.5 compare
phage 24hr PHYTO10 MOI 10 -1.4 -1.3 compare
phage 36hr PHYTO4 MOI 0.1 -1.3 -1.4 compare
phage P. phyto PHYTO2 MOI 0.1 -1.2 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -1.2 -3.1 compare
phage 36hr PHYTO3 MOI 1 -1.1 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.1 -2.8 compare
nophagecontrol 36hr Phyto Lib only -1.0 -1.1 compare
phage 24hr PHYTO2 MOI 1 -1.0 -1.0 compare
carbon source L-Fucose (C) -0.9 -1.9 compare
phage 24hr PHYTO4 MOI 10 -0.9 -0.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +3.2 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.6 +4.2 compare