Fitness data for BPHYT_RS28215 in Burkholderia phytofirmans PsJN

D-ribose transporter ATP binding protein
SEED: Predicted L-rhamnose ABC transporter, ATP-binding component
KEGG: ribose transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source L-Rhamnose (C) -1.1 -3.8 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.0 compare
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days -0.9 -1.4 compare
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.9 -1.5 compare
phage 24hr PHYTO3 MOI 10 +0.9 +2.2 compare
phage 36hr PHYTO9 MOI 1 +0.9 +2.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.9 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +1.0 +0.6 compare
motility inner cut, LB soft agar motility assay +1.0 +3.8 compare
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +1.0 +1.7 compare
nophagecontrol 24hr Phyto Lib Only +1.0 +2.7 compare
nophagecontrol 36hr Phyto Lib Only +1.1 +1.6 compare
supernatant control Vogels_fungal_media 0.1X +1.1 +1.7 compare
supernatant control Vogels_fungal_media; pH 5.5 +1.2 +1.5 compare
phage 36hr PHYTO6 MOI 1 +1.3 +2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.4 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.4 +3.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.5 +1.6 compare
carbon source Malonic (C) +2.2 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +6.3 +1.5 compare